Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | APR52_09615 | Not Available | Negative | 2078892 - 2079545 | 23294.0 |
| lysr family transcriptional regulator | APR52_09620 | P43011 | Positive | 2079697 - 2080578 | 31715.4 |
| hypothetical protein | APR52_09625 | Not Available | Negative | 2080628 - 2080984 | 13324.6 |
| hypothetical protein | APR52_09630 | Not Available | Negative | 2081020 - 2081547 | 18693.1 |
| proline iminopeptidase | APR52_09635 | O32449 | Negative | 2081686 - 2082642 | 35778.3 |
| short-chain dehydrogenase | APR52_09640 | Q99J47 | Negative | 2082776 - 2083666 | 30970.0 |
| alkyl hydroperoxide reductase | APR52_09645 | Not Available | Negative | 2083870 - 2084430 | 20037.2 |
| carboxymuconolactone decarboxylase | APR52_09650 | Not Available | Negative | 2084472 - 2085017 | 18743.3 |
| arac family transcriptional regulator | APR52_09655 | Not Available | Positive | 2085118 - 2085987 | 31974.0 |
| tetr family transcriptional regulator | APR52_09665 | Not Available | Positive | 2086725 - 2087348 | 23185.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
