Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase | APR52_09460 | P37333 | Negative | 2046710 - 2048074 | 52081.1 |
| electron transfer flavoprotein | APR52_09465 | P23101 | Negative | 2048128 - 2049135 | 35070.8 |
| hypothetical protein | APR52_09470 | Not Available | Negative | 2049159 - 2050148 | 33828.9 |
| transcriptional regulator | APR52_09475 | Not Available | Positive | 2050324 - 2051088 | 27814.7 |
| xre family transcriptional regulator | APR52_09480 | Not Available | Positive | 2051145 - 2051432 | 10896.1 |
| phosphatidylinositol kinase | APR52_09485 | Not Available | Positive | 2051422 - 2052642 | 44946.7 |
| hypothetical protein | APR52_09490 | Not Available | Negative | 2052661 - 2053026 | 13460.9 |
| hypothetical protein | APR52_09495 | Not Available | Negative | 2053070 - 2054542 | 52976.2 |
| polyketide cyclase | APR52_09500 | Not Available | Negative | 2054542 - 2054982 | 16495.3 |
| hypothetical protein | APR52_09505 | P77306 | Negative | 2054986 - 2056674 | 61887.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
