Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_00300 | Not Available | Negative | 58736 - 59716 | 35209.9 |
| aldehyde dehydrogenase | APR52_00305 | H8ZPX2 | Positive | 59832 - 61250 | 49536.3 |
| abc transporter atp-binding protein | APR52_00310 | Not Available | Negative | 61266 - 61982 | 25654.6 |
| abc transporter atp-binding protein | APR52_00315 | Not Available | Negative | 61986 - 62744 | 26662.5 |
| abc transporter permease | APR52_00325 | Not Available | Negative | 63676 - 64569 | 31337.8 |
| hypothetical protein | APR52_00330 | Not Available | Positive | 64719 - 65174 | 17049.2 |
| hypothetical protein | APR52_00335 | Q6N8N2 | Positive | 65188 - 66399 | 44294.1 |
| hypothetical protein | APR52_00340 | Not Available | Positive | 66525 - 67655 | 39104.3 |
| mfs transporter | APR52_00345 | Not Available | Positive | 67730 - 68941 | 40922.8 |
| hypothetical protein | APR52_00350 | Not Available | Positive | 69034 - 69468 | 16530.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
