Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_09410 | Not Available | Positive | 2037122 - 2039776 | 96721.5 |
| hypothetical protein | APR52_09415 | Not Available | Negative | 2039798 - 2040034 | 8113.0 |
| alkylhydroperoxidase | APR52_09420 | Not Available | Negative | 2040153 - 2040617 | 16608.9 |
| dna-binding protein | APR52_09425 | P49309 | Negative | 2040738 - 2042159 | 51924.0 |
| hypothetical protein | APR52_09430 | Not Available | Negative | 2042176 - 2042958 | 28196.6 |
| hypothetical protein | APR52_09435 | Not Available | Negative | 2043009 - 2043977 | 34106.3 |
| hypothetical protein | APR52_09440 | Not Available | Negative | 2043995 - 2044978 | 32854.1 |
| hypothetical protein | APR52_09445 | Not Available | Negative | 2045059 - 2045253 | 7098.56 |
| 3-phenylpropionate dioxygenase | APR52_09450 | Q53123 | Negative | 2045263 - 2045853 | 23396.9 |
| short-chain dehydrogenase | APR52_09455 | Not Available | Negative | 2045880 - 2046689 | 26902.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
