Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | APR52_09360 | Not Available | Positive | 2026800 - 2029283 | 89999.4 |
| hypothetical protein | APR52_09365 | Not Available | Positive | 2029283 - 2029561 | 9659.07 |
| hypothetical protein | APR52_09370 | Not Available | Positive | 2029548 - 2029844 | 10284.8 |
| peptidase | APR52_09375 | Not Available | Positive | 2029848 - 2031434 | 56554.8 |
| hypothetical protein | APR52_09380 | Not Available | Positive | 2031615 - 2032070 | 16953.1 |
| hypothetical protein | APR52_09385 | Not Available | Positive | 2032178 - 2032498 | 11902.5 |
| cell filamentation protein fic | APR52_09390 | Not Available | Positive | 2032482 - 2033216 | 27577.6 |
| methylmalonate-semialdehyde dehydrogenase | APR52_09395 | Q9I702 | Negative | 2033345 - 2034856 | 53961.0 |
| lysr family transcriptional regulator | APR52_09400 | Not Available | Positive | 2034983 - 2035927 | 34416.3 |
| metallophosphatase | APR52_09405 | Not Available | Positive | 2035986 - 2037119 | 40737.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
