Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monooxygenase | APR52_09310 | A0A0C6DRW4 | Negative | 2018034 - 2019275 | 44697.3 |
| nadh-dependent fmn reductase | APR52_09315 | Q3K9A2 | Positive | 2019560 - 2020156 | 21589.3 |
| hypothetical protein | APR52_09320 | Not Available | Negative | 2020181 - 2020525 | 12393.9 |
| alkanesulfonate monooxygenase | APR52_09325 | A9C3F6 | Positive | 2020657 - 2021730 | 39318.3 |
| alkanesulfonate monooxygenase | APR52_09330 | Q65YW9 | Positive | 2021746 - 2022855 | 40401.9 |
| methyltransferase | APR52_09335 | Not Available | Positive | 2022911 - 2023789 | 31572.6 |
| hypothetical protein | APR52_09340 | Not Available | Positive | 2023950 - 2024492 | 19974.9 |
| hypothetical protein | APR52_09345 | Q9UZA3 | Negative | 2024570 - 2024950 | 13915.7 |
| rna polymerase subunit sigma | APR52_09350 | Not Available | Positive | 2025112 - 2025621 | 18764.7 |
| iron dicitrate transport regulator fecr | APR52_09355 | Not Available | Positive | 2025629 - 2026603 | 35508.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
