Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_09255 | Not Available | Negative | 2004684 - 2005487 | 28703.1 |
| hypothetical protein | APR52_09260 | Not Available | Positive | 2005772 - 2007454 | 60970.6 |
| abc transporter substrate-binding protein | APR52_09265 | Not Available | Positive | 2007712 - 2009316 | 58276.9 |
| abc transporter permease | APR52_09270 | A1A970 | Positive | 2009324 - 2010241 | 32566.6 |
| peptide abc transporter permease | APR52_09275 | Not Available | Positive | 2010238 - 2011113 | 30653.9 |
| hypothetical protein | APR52_09280 | Q5PGP3 | Positive | 2011110 - 2012798 | 60213.1 |
| abc transporter substrate-binding protein | APR52_09285 | Not Available | Negative | 2012808 - 2013833 | 36384.0 |
| metal abc transporter substrate-binding protein | APR52_09290 | Not Available | Positive | 2014066 - 2014884 | 29805.7 |
| methionine abc transporter atp-binding protein | APR52_09295 | Q39AT4 | Positive | 2014881 - 2015987 | 38756.1 |
| monooxygenase | APR52_09305 | Not Available | Positive | 2016783 - 2018006 | 43916.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
