Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_09205 | Not Available | Positive | 1996109 - 1996618 | 18265.0 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | APR52_09210 | Q7NUF2 | Positive | 1996689 - 1997534 | 30250.9 |
| hypothetical protein | APR52_09215 | Not Available | Positive | 1997575 - 1997811 | 8715.26 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | APR52_09220 | P0AB92 | Positive | 1997869 - 1998993 | 40289.4 |
| nad(p)h dehydrogenase | APR52_09225 | Q9JI75 | Negative | 1999002 - 1999625 | 22047.9 |
| tetr family transcriptional regulator | APR52_09230 | Not Available | Positive | 1999704 - 2000312 | 21775.4 |
| hypothetical protein | APR52_09235 | Not Available | Negative | 2000331 - 2001218 | 31689.4 |
| peptidase | APR52_09240 | A4XSC0 | Positive | 2001517 - 2002863 | 46661.4 |
| sulfonate abc transporter substrate-binding protein | APR52_09245 | Not Available | Negative | 2002903 - 2003910 | 36350.1 |
| sulfonate abc transporter atp-binding protein | APR52_09250 | Q13GD4 | Negative | 2003953 - 2004687 | 26158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
