Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_09155 | P18773 | Positive | 1985992 - 1986891 | 31284.1 |
| lysr family transcriptional regulator | APR52_09160 | Not Available | Positive | 1986952 - 1987866 | 33383.2 |
| cupin | APR52_09165 | Not Available | Positive | 1988006 - 1988533 | 20493.3 |
| 3-oxoacyl-acp reductase | APR52_09170 | Q1NEI6 | Positive | 1988530 - 1989270 | 25139.9 |
| abc transporter substrate-binding protein | APR52_09175 | Not Available | Positive | 1989341 - 1990303 | 33986.0 |
| 2-deoxy-d-gluconate 3-dehydrogenase | APR52_09180 | P50842 | Positive | 1990329 - 1991048 | 24333.6 |
| iclr family transcriptional regulator | APR52_09185 | Q8Z8R2 | Positive | 1991144 - 1991986 | 29739.9 |
| pyridine nucleotide-disulfide oxidoreductase | APR52_09190 | P43494 | Negative | 1991999 - 1993210 | 42545.9 |
| two-component system sensor histidine kinase/response regulator | APR52_09195 | Q9P896 | Positive | 1993610 - 1995568 | 71237.8 |
| hypothetical protein | APR52_09200 | A9HVV4 | Positive | 1995606 - 1995941 | 12046.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
