Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_09105 | Not Available | Negative | 1977225 - 1978196 | 34149.5 |
| hypothetical protein | APR52_09110 | Not Available | Negative | 1978337 - 1979053 | 26434.9 |
| hypothetical protein | APR52_09115 | Q45389 | Positive | 1979206 - 1980123 | 32038.9 |
| hypothetical protein | APR52_09120 | P17725 | Positive | 1980134 - 1980982 | 29725.0 |
| formyl-coa transferase | APR52_09125 | Not Available | Positive | 1981021 - 1982160 | 41319.4 |
| hypothetical protein | APR52_09130 | Not Available | Positive | 1982222 - 1982578 | 13369.1 |
| hypothetical protein | APR52_09135 | Not Available | Positive | 1982755 - 1983042 | 10918.0 |
| hypothetical protein | APR52_09140 | Not Available | Positive | 1983068 - 1983571 | 18945.3 |
| addiction module antidote protein | APR52_09145 | P21367 | Positive | 1983876 - 1984490 | 21666.3 |
| dehydrogenase | APR52_09150 | Q6UPE0 | Positive | 1984487 - 1985992 | 52529.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
