Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| terephthalate 1,2-dioxygenase | APR52_09055 | Q3C1E2 | Negative | 1965025 - 1965489 | 17462.9 |
| rieske (2fe-2s) protein | APR52_09060 | Q3C1E3 | Negative | 1965514 - 1966767 | 45842.9 |
| receptor | APR52_09065 | Not Available | Negative | 1966775 - 1967761 | 34678.0 |
| iclr family transcriptional regulator | APR52_09070 | Not Available | Positive | 1967843 - 1968646 | 29069.2 |
| hypothetical protein | APR52_09075 | Not Available | Positive | 1968643 - 1969104 | 16973.2 |
| hypothetical protein | APR52_09080 | Not Available | Negative | 1969117 - 1971918 | 99522.9 |
| hypothetical protein | APR52_09085 | Not Available | Positive | 1972271 - 1974445 | 76809.5 |
| alpha/beta hydrolase | APR52_09090 | Not Available | Positive | 1974579 - 1975382 | 29309.3 |
| hypothetical protein | APR52_09095 | Not Available | Negative | 1975389 - 1976711 | 48179.6 |
| hypothetical protein | APR52_09100 | Not Available | Negative | 1976854 - 1977222 | 13109.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
