Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase | APR52_09000 | B6IYC9 | Positive | 1955082 - 1955699 | 22533.7 |
| 3-isopropylmalate dehydrogenase | APR52_09005 | Q5P1J6 | Positive | 1955723 - 1956796 | 37795.0 |
| hypothetical protein | APR52_09010 | Not Available | Negative | 1956822 - 1957043 | 8655.58 |
| polyvinylalcohol dehydrogenase | APR52_09015 | P42409 | Positive | 1957421 - 1958266 | 30434.9 |
| anti-anti-sigma factor | APR52_09020 | P42410 | Positive | 1958278 - 1958652 | 13292.6 |
| anti-sigma regulatory factor | APR52_09025 | P42411 | Positive | 1958642 - 1959046 | 14536.5 |
| histidine kinase | APR52_09030 | Not Available | Positive | 1959037 - 1960074 | 37023.2 |
| histidine kinase | APR52_09040 | Q9XH57 | Positive | 1961030 - 1963012 | 71631.4 |
| oxidoreductase | APR52_09045 | Q3C1D2 | Negative | 1963023 - 1964054 | 36908.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | APR52_09050 | Q3C1E1 | Negative | 1964051 - 1965028 | 33196.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
