Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | APR52_08895 | Not Available | Negative | 1933490 - 1934512 | 36907.1 |
| rna polymerase subunit sigma-24 | APR52_08900 | Not Available | Negative | 1934521 - 1935096 | 21798.2 |
| metallophosphatase | APR52_08905 | O83142 | Positive | 1935191 - 1937185 | 68660.4 |
| glutamate dehydrogenase | APR52_08910 | P00370 | Positive | 1937401 - 1938744 | 48024.4 |
| prevent-host-death protein | APR52_08915 | Not Available | Positive | 1938812 - 1939099 | 10702.8 |
| deaminase | APR52_08920 | Not Available | Negative | 1939152 - 1939727 | 20813.0 |
| mandelate racemase | APR52_08930 | Q89FH0 | Positive | 1940801 - 1941967 | 43191.4 |
| hypothetical protein | APR52_08935 | Not Available | Positive | 1942098 - 1942406 | 10965.0 |
| hypothetical protein | APR52_08940 | Not Available | Negative | 1942391 - 1943344 | 34860.0 |
| hypothetical protein | APR52_08945 | Q0KBD1 | Positive | 1943444 - 1944250 | 29983.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
