Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_08745 | Not Available | Negative | 1899981 - 1900919 | 34206.9 |
| dimethylmenaquinone methyltransferase | APR52_08750 | Q57252 | Positive | 1901139 - 1904069 | 107144.0 |
| dihydrodipicolinate synthetase | APR52_08755 | A9WE23 | Positive | 1904089 - 1905012 | 32675.4 |
| hypothetical protein | APR52_08760 | Not Available | Negative | 1905028 - 1905876 | 31483.8 |
| sugar abc transporter atp-binding protein | APR52_08765 | Q8U9B0 | Positive | 1906102 - 1907598 | 53293.4 |
| abc transporter permease | APR52_08770 | P23200 | Positive | 1907618 - 1908703 | 37920.5 |
| sugar abc transporter substrate-binding protein | APR52_08775 | Not Available | Positive | 1908766 - 1909872 | 38864.1 |
| hypothetical protein | APR52_08780 | Not Available | Positive | 1909991 - 1911238 | 46499.7 |
| hypothetical protein | APR52_08785 | Q8XTY1 | Negative | 1911256 - 1912122 | 32136.8 |
| hypothetical protein | APR52_08790 | Not Available | Positive | 1912251 - 1912706 | 16397.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
