Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_08635 | O06695 | Positive | 1880783 - 1881847 | 38071.2 |
| hypothetical protein | APR52_08640 | Not Available | Positive | 1881852 - 1882175 | 11978.7 |
| homogentisate 1,2-dioxygenase | APR52_08645 | Q9KSB4 | Positive | 1882183 - 1883373 | 43948.1 |
| hypothetical protein | APR52_08650 | Not Available | Positive | 1883370 - 1884350 | 34724.2 |
| hypothetical protein | APR52_08655 | Q86WU2 | Positive | 1884422 - 1885726 | 46390.6 |
| abc transporter substrate-binding protein | APR52_08660 | Not Available | Positive | 1885765 - 1886730 | 33012.8 |
| abc transporter permease | APR52_08665 | Not Available | Positive | 1886749 - 1887675 | 31611.7 |
| abc transporter atp-binding protein | APR52_08670 | Q890R3 | Positive | 1887669 - 1888463 | 29068.5 |
| hypothetical protein | APR52_08680 | Not Available | Positive | 1889761 - 1890120 | 12690.4 |
| mfs transporter | APR52_08685 | P0A2G4 | Positive | 1890145 - 1891449 | 45849.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
