Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | APR52_08485 | P41655 | Negative | 1845223 - 1846692 | 53915.4 |
| 4-chlorobenzoate--coa ligase | APR52_08490 | P86831 | Negative | 1846733 - 1848319 | 57213.0 |
| (2fe-2s)-binding protein | APR52_08495 | D7REY5 | Negative | 1848321 - 1848839 | 18552.4 |
| carbon monoxide dehydrogenase | APR52_08500 | O87681 | Negative | 1848836 - 1849666 | 29953.9 |
| carbon monoxide dehydrogenase | APR52_08505 | Not Available | Negative | 1849663 - 1852722 | 108258.0 |
| aldehyde dehydrogenase | APR52_08510 | P80668 | Negative | 1852733 - 1854187 | 51417.5 |
| lysr family transcriptional regulator | APR52_08515 | Not Available | Positive | 1854378 - 1855295 | 33504.0 |
| hypothetical protein | APR52_08520 | Not Available | Positive | 1855563 - 1856549 | 36213.4 |
| epimerase | APR52_08525 | Q5XLY0 | Positive | 1856569 - 1857603 | 36690.4 |
| hypothetical protein | APR52_08530 | Not Available | Negative | 1857617 - 1858015 | 14476.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
