Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 38909 - 39237 | Not Available |
| cytosine deaminase | APR52_00200 | Q8TRA4 | Negative | 38604 - 40025 | 50441.0 |
| hypothetical protein | APR52_00205 | Not Available | Negative | 40066 - 40824 | 25280.5 |
| mfs transporter | APR52_00210 | Not Available | Negative | 40821 - 42071 | 43930.4 |
| polysaccharide deacetylase | APR52_00215 | Not Available | Negative | 42150 - 43028 | 33140.4 |
| fumarylacetoacetate hydrolase | APR52_00220 | Not Available | Negative | 43054 - 43758 | 25757.6 |
| arac family transcriptional regulator | APR52_00225 | Not Available | Positive | 43963 - 44862 | 33776.3 |
| dna-binding protein | APR52_00230 | Not Available | Positive | 44876 - 46096 | 42797.0 |
| glutamine cyclotransferase | APR52_00235 | Not Available | Positive | 46145 - 46807 | 23654.6 |
| thioredoxin | APR52_00240 | Not Available | Positive | 46837 - 47607 | 28979.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
