Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | APR52_08385 | Q2YLF8 | Negative | 1825433 - 1826554 | 38731.5 |
| tetr family transcriptional regulator | APR52_08390 | Not Available | Positive | 1826755 - 1827342 | 22209.7 |
| lysr family transcriptional regulator | APR52_08395 | Not Available | Negative | 1827370 - 1828284 | 34293.4 |
| twin-arginine translocation pathway signal protein | APR52_08400 | Not Available | Positive | 1828504 - 1829505 | 35503.8 |
| abc transporter permease | APR52_08405 | Not Available | Positive | 1829682 - 1830377 | 25713.2 |
| abc transporter | APR52_08410 | Q7W9U5 | Positive | 1830379 - 1831185 | 29283.0 |
| enoyl-coa hydratase | APR52_08415 | Not Available | Positive | 1831206 - 1832000 | 28987.9 |
| thiolase | APR52_08420 | Not Available | Positive | 1832004 - 1833170 | 41782.9 |
| dna-binding protein | APR52_08425 | Not Available | Positive | 1833176 - 1833604 | 15482.8 |
| amp-dependent synthetase | APR52_08430 | Not Available | Positive | 1833612 - 1835162 | 55943.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
