Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_08335 | Not Available | Positive | 1817064 - 1817969 | 33078.4 |
| oxidoreductase | APR52_08340 | Not Available | Positive | 1818145 - 1819281 | 41029.1 |
| phob family transcriptional regulator | APR52_08345 | Q9ZHD3 | Positive | 1819326 - 1820033 | 25883.3 |
| hypothetical protein | APR52_08350 | Not Available | Positive | 1820030 - 1821397 | 48769.8 |
| hypothetical protein | APR52_08355 | Not Available | Positive | 1821538 - 1822026 | 16988.3 |
| hypothetical protein | APR52_08360 | Not Available | Positive | 1822067 - 1823578 | 52896.3 |
| hypothetical protein | APR52_08365 | Not Available | Positive | 1823780 - 1824007 | 8473.23 |
| hypothetical protein | APR52_08370 | Not Available | Negative | 1824150 - 1824368 | 7921.47 |
| toxin-antitoxin system protein | APR52_08375 | Not Available | Positive | 1824639 - 1824914 | 10165.3 |
| gcn5 family acetyltransferase | APR52_08380 | Not Available | Positive | 1824911 - 1825405 | 17680.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
