Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | APR52_08175 | Not Available | Positive | 1781365 - 1782126 | 26826.4 |
| sugar abc transporter | APR52_08180 | Not Available | Positive | 1782328 - 1783584 | 44663.6 |
| sugar abc transporter | APR52_08185 | Not Available | Positive | 1783637 - 1784557 | 33511.2 |
| sugar abc transporter | APR52_08190 | Not Available | Positive | 1784557 - 1785387 | 29213.5 |
| sugar abc transporter | APR52_08195 | Q5LX21 | Positive | 1785558 - 1786739 | 42454.6 |
| racemase | APR52_08200 | Not Available | Positive | 1786775 - 1787980 | 43629.1 |
| hypothetical protein | APR52_08205 | Not Available | Positive | 1787977 - 1789119 | 40710.1 |
| enoyl-coa hydratase | APR52_08210 | Not Available | Positive | 1789152 - 1789919 | 27227.8 |
| fumarylacetoacetate hydrolase | APR52_08215 | Not Available | Positive | 1789930 - 1791117 | 41575.6 |
| laci family transcriptional regulator | APR52_08220 | O31690 | Positive | 1791164 - 1792210 | 37960.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
