Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_08125 | Not Available | Positive | 1771541 - 1771750 | 7455.88 |
| hypothetical protein | APR52_08130 | Not Available | Negative | 1771775 - 1772458 | 25226.2 |
| hypothetical protein | APR52_08135 | Q2YKI6 | Positive | 1772551 - 1773624 | 37767.9 |
| hypothetical protein | APR52_08140 | Not Available | Positive | 1773634 - 1774320 | 24851.4 |
| hypothetical protein | APR52_08145 | Not Available | Positive | 1774313 - 1776127 | 66499.2 |
| glutathione s-transferase | APR52_08150 | Q52828 | Positive | 1776137 - 1776781 | 23636.4 |
| oxidoreductase | APR52_08155 | Not Available | Positive | 1776931 - 1778058 | 41248.3 |
| xylose isomerase | APR52_08160 | Not Available | Positive | 1778109 - 1779020 | 34228.3 |
| hypothetical protein | APR52_08165 | Not Available | Positive | 1779017 - 1780189 | 43937.6 |
| laci family transcriptional regulator | APR52_08170 | Not Available | Positive | 1780262 - 1781323 | 38370.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
