Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_00150 | Not Available | Negative | 29736 - 30263 | 19314.5 |
| hypothetical protein | APR52_00155 | Not Available | Positive | 30414 - 30830 | 14983.0 |
| hypothetical protein | APR52_00160 | P71037 | Negative | 30849 - 31448 | 20632.1 |
| hypothetical protein | APR52_00165 | Not Available | Negative | 31448 - 32113 | 24530.1 |
| nad(p)h dehydrogenase | APR52_00170 | Q9RYU4 | Positive | 32290 - 32907 | 21749.7 |
| hypothetical protein | APR52_00175 | Not Available | Positive | 32963 - 33811 | 29213.1 |
| hypothetical protein | APR52_00180 | Not Available | Positive | 33968 - 34813 | 31312.3 |
| hypothetical protein | APR52_00185 | Not Available | Positive | 34897 - 35487 | 22282.6 |
| aromatic ring hydroxylase | APR52_00190 | Q8KN28 | Positive | 35490 - 37265 | 65750.0 |
| hypothetical protein | APR52_00195 | Not Available | Positive | 37294 - 38277 | 34602.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
