Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_07875 | Not Available | Positive | 1722384 - 1722587 | 7246.42 |
| porin | APR52_07880 | Not Available | Positive | 1722797 - 1723855 | 36804.4 |
| mfs transporter | APR52_07885 | P71369 | Positive | 1724066 - 1725307 | 44168.9 |
| oxidoreductase | APR52_07890 | Q5WFJ3 | Positive | 1725361 - 1726215 | 30848.5 |
| dihydroorotate dehydrogenase | APR52_07895 | A5G3H0 | Positive | 1726208 - 1727158 | 33726.0 |
| allantoate amidohydrolase | APR52_07900 | P77425 | Positive | 1727173 - 1728429 | 45140.9 |
| dihydroorotase | APR52_07905 | Q2G9U3 | Positive | 1728438 - 1729508 | 38553.5 |
| dna-binding protein | APR52_07910 | Not Available | Positive | 1729598 - 1730503 | 33649.9 |
| orotate phosphoribosyltransferase | APR52_07915 | C6BW21 | Positive | 1730521 - 1731213 | 24642.7 |
| hypothetical protein | APR52_07920 | Not Available | Positive | 1731210 - 1731536 | 11993.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
