Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | APR52_07820 | Not Available | Negative | 1711263 - 1711742 | 18029.3 |
| hypothetical protein | APR52_07825 | Not Available | Positive | 1711918 - 1712901 | 36605.0 |
| amidase | APR52_07830 | Not Available | Positive | 1713006 - 1714463 | 52055.0 |
| hypothetical protein | APR52_07835 | Not Available | Positive | 1714505 - 1715488 | 34632.4 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_07840 | Not Available | Positive | 1715851 - 1716900 | 37688.7 |
| abc transporter atp-binding protein | APR52_07845 | P0A9V3 | Positive | 1716912 - 1717661 | 26425.4 |
| abc transporter atp-binding protein | APR52_07850 | P0A192 | Positive | 1717648 - 1718346 | 25063.6 |
| abc transporter permease | APR52_07855 | Not Available | Positive | 1718357 - 1719223 | 30425.3 |
| abc transporter permease | APR52_07860 | Not Available | Positive | 1719230 - 1720288 | 37727.7 |
| acetoin utilization protein | APR52_07865 | Not Available | Positive | 1720260 - 1721372 | 40123.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
