Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | APR52_07770 | O69717 | Positive | 1701822 - 1702289 | 17244.8 |
| toxin-antitoxin system, toxin component, pin family protein | APR52_07775 | L0TGF0 | Positive | 1702286 - 1702861 | 21544.9 |
| short-chain dehydrogenase | APR52_07780 | Not Available | Negative | 1702955 - 1703728 | 25961.9 |
| 3-ketoacyl-acp reductase | APR52_07785 | Not Available | Negative | 1703725 - 1704519 | 27075.4 |
| aminotransferase | APR52_07790 | C0ZUX9 | Negative | 1704516 - 1705907 | 50368.2 |
| had family hydrolase | APR52_07795 | Not Available | Negative | 1705904 - 1706578 | 24727.5 |
| hypothetical protein | APR52_07800 | Q8YDP7 | Negative | 1706584 - 1707828 | 42832.8 |
| hypothetical protein | APR52_07805 | Q9I6J2 | Negative | 1707825 - 1709195 | 49586.5 |
| aldehyde dehydrogenase | APR52_07810 | Q1JUP4 | Negative | 1709192 - 1710634 | 51559.9 |
| hypothetical protein | APR52_07815 | Not Available | Positive | 1710760 - 1711257 | 18315.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
