Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | APR52_07715 | Not Available | Positive | 1687240 - 1688160 | 32750.1 |
| carnitine dehydratase | APR52_07720 | Not Available | Positive | 1688278 - 1689756 | 53318.6 |
| phosphonopyruvate decarboxylase | APR52_07725 | Not Available | Positive | 1689802 - 1690320 | 18789.6 |
| aldehyde dehydrogenase | APR52_07730 | Not Available | Positive | 1690329 - 1690934 | 21153.5 |
| carbonate dehydratase | APR52_07735 | Not Available | Positive | 1690957 - 1691649 | 25423.4 |
| hypothetical protein | APR52_07740 | Not Available | Positive | 1691741 - 1692745 | 34522.1 |
| feruloyl esterase | APR52_07745 | Not Available | Negative | 1692905 - 1694752 | 62746.3 |
| nad-dependent dehydratase | APR52_07750 | A1CTL5 | Negative | 1694947 - 1695591 | 22634.7 |
| diguanylate cyclase | APR52_07755 | Not Available | Negative | 1695637 - 1698657 | 110558.0 |
| abc transporter substrate-binding protein | APR52_07760 | Not Available | Negative | 1698654 - 1699715 | 38180.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
