Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_07665 | Not Available | Positive | 1676903 - 1677898 | 37139.6 |
| hypothetical protein | APR52_07670 | Not Available | Positive | 1677910 - 1678611 | 25077.9 |
| hypothetical protein | APR52_07675 | Not Available | Positive | 1678628 - 1679080 | 16172.6 |
| acyl-coa dehydrogenase | APR52_07680 | A9WC41 | Positive | 1679183 - 1680037 | 31417.5 |
| acyl-coa dehydrogenase | APR52_07685 | Q2LQN9 | Positive | 1680060 - 1681223 | 43259.6 |
| coa-transferase | APR52_07690 | Not Available | Positive | 1681229 - 1682425 | 43175.5 |
| 2-methylcitrate dehydratase | APR52_07695 | Not Available | Positive | 1682439 - 1683815 | 48120.1 |
| lysr family transcriptional regulator | APR52_07700 | Q3MCB5 | Positive | 1683862 - 1684788 | 33731.4 |
| aldolase | APR52_07705 | Q9RUZ0 | Negative | 1684838 - 1685680 | 29747.9 |
| aminotransferase | APR52_07710 | A0R5R7 | Positive | 1685933 - 1687243 | 46990.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
