Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_07615 | Not Available | Negative | 1667897 - 1668622 | 26002.7 |
| hypothetical protein | APR52_07620 | Not Available | Negative | 1668790 - 1669443 | 21991.6 |
| hypothetical protein | APR52_07625 | Not Available | Negative | 1669440 - 1670150 | 25612.9 |
| chitin deacetylase | APR52_07630 | Not Available | Negative | 1670147 - 1671061 | 34417.0 |
| abc transporter permease | APR52_07635 | Not Available | Negative | 1671076 - 1671870 | 28265.6 |
| abc transporter permease | APR52_07640 | Not Available | Negative | 1671867 - 1672721 | 30142.9 |
| spermidine/putrescine abc transporter atp-binding protein | APR52_07645 | Not Available | Negative | 1672730 - 1673821 | 38589.5 |
| hypothetical protein | APR52_07650 | P44731 | Negative | 1673832 - 1674872 | 37140.5 |
| damage-inducible protein dinb | APR52_07655 | Not Available | Negative | 1675048 - 1675557 | 18515.7 |
| abc transporter atp-binding protein | APR52_07660 | Q5YU15 | Positive | 1675786 - 1676826 | 37443.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
