Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR52_07465 | Q55106 | Positive | 1637610 - 1638356 | 26668.6 |
| hypothetical protein | APR52_07470 | Not Available | Positive | 1638546 - 1638881 | 12383.1 |
| virulence factor | APR52_07475 | Q4UNB3 | Positive | 1639068 - 1639298 | 8468.93 |
| plasmid maintenance protein | APR52_07480 | O06662 | Positive | 1639299 - 1639703 | 14989.0 |
| hypothetical protein | APR52_07485 | Not Available | Positive | 1639775 - 1641904 | 77417.3 |
| mfs transporter | APR52_07490 | P96675 | Negative | 1641949 - 1643148 | 41036.2 |
| transcriptional regulator | APR52_07495 | Not Available | Negative | 1643225 - 1643782 | 20232.3 |
| hypothetical protein | APR52_07500 | Not Available | Positive | 1644150 - 1645706 | 56412.8 |
| hypothetical protein | APR52_07505 | Not Available | Positive | 1645747 - 1646742 | 35247.5 |
| hypothetical protein | APR52_07510 | D8L2V9 | Positive | 1646739 - 1647965 | 44206.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
