Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | APR52_07415 | Q44585 | Negative | 1626521 - 1627513 | 35903.1 |
| hypothetical protein | APR52_07420 | Not Available | Positive | 1627946 - 1628263 | 11873.3 |
| hypothetical protein | APR52_07425 | Q0K020 | Positive | 1628572 - 1629309 | 25972.6 |
| circadian clock protein kaic | APR52_07430 | P73860 | Positive | 1629475 - 1630965 | 53526.9 |
| histidine kinase | APR52_07435 | P0DOA0 | Positive | 1630976 - 1632691 | 61239.3 |
| cupin | APR52_07440 | Not Available | Positive | 1632749 - 1633777 | 37295.6 |
| alkylhydroperoxidase | APR52_07445 | Not Available | Positive | 1633839 - 1634423 | 20084.0 |
| acyl-coa dehydrogenase | APR52_07450 | Not Available | Positive | 1634413 - 1635489 | 37682.9 |
| abc transporter atp-binding protein | APR52_07455 | Q39LW7 | Positive | 1635507 - 1636349 | 30280.8 |
| abc transporter substrate-binding protein | APR52_07460 | Q44292 | Positive | 1636346 - 1637608 | 45321.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
