Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_00100 | Not Available | Negative | 21872 - 22183 | 11166.7 |
| mfs transporter | APR52_00105 | Not Available | Negative | 22249 - 23469 | 42275.3 |
| lysr family transcriptional regulator | APR52_00110 | Not Available | Positive | 23602 - 24540 | 34766.9 |
| hypothetical protein | APR52_00115 | Not Available | Negative | 24602 - 25012 | 14645.4 |
| hypothetical protein | APR52_00120 | Not Available | Negative | 25173 - 25814 | 23797.9 |
| glyoxalase | APR52_00125 | Not Available | Negative | 25839 - 26204 | 13203.6 |
| quinone oxidoreductase | APR52_00130 | P40783 | Negative | 26309 - 27307 | 35156.1 |
| hypothetical protein | APR52_00135 | Not Available | Positive | 27395 - 27718 | 11157.3 |
| 2-deoxy-d-gluconate 3-dehydrogenase | APR52_00140 | Not Available | Positive | 27723 - 28541 | 28546.5 |
| hypothetical protein | APR52_00145 | Not Available | Positive | 28538 - 29731 | 40915.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
