Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hyld | APR52_07365 | Not Available | Positive | 1611516 - 1612658 | 39574.5 |
| hypothetical protein | APR52_07370 | P94177 | Positive | 1612651 - 1615746 | 111441.0 |
| histidine kinase | APR52_07375 | Not Available | Positive | 1615759 - 1617255 | 51820.4 |
| translation initiation inhibitor, yjgf family protein | APR52_07380 | Not Available | Positive | 1617252 - 1617623 | 13401.0 |
| hypothetical protein | APR52_07385 | Not Available | Positive | 1617623 - 1617976 | 12303.8 |
| hypothetical protein | APR52_07390 | Not Available | Positive | 1618152 - 1619639 | 54594.0 |
| hypothetical protein | APR52_07395 | Not Available | Negative | 1619648 - 1621039 | 50730.5 |
| hypothetical protein | APR52_07400 | Not Available | Negative | 1621039 - 1621740 | 26269.8 |
| hypothetical protein | APR52_07405 | Q51487 | Negative | 1621805 - 1623325 | 54188.2 |
| acriflavin resistance protein | APR52_07410 | Not Available | Negative | 1623387 - 1626524 | 111609.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
