Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell shape determination protein ccma | APR52_07205 | Not Available | Positive | 1572889 - 1573428 | 18356.8 |
| hypothetical protein | APR52_07210 | Not Available | Negative | 1573429 - 1574331 | 33233.6 |
| peptidase m20 | APR52_07215 | Not Available | Positive | 1574427 - 1575938 | 54196.6 |
| alpha/beta hydrolase | APR52_07220 | O07427 | Positive | 1575935 - 1576798 | 30649.7 |
| hypothetical protein | APR52_07225 | P33346 | Negative | 1576809 - 1579745 | 107067.0 |
| mfs transporter | APR52_07230 | A6X7E7 | Negative | 1579765 - 1580934 | 40870.9 |
| hypothetical protein | APR52_07235 | Not Available | Negative | 1581064 - 1581522 | 14811.9 |
| lysr family transcriptional regulator | APR52_07245 | Not Available | Positive | 1582254 - 1583150 | 32679.3 |
| arac family transcriptional regulator | APR52_07250 | Not Available | Negative | 1583217 - 1584011 | 28816.1 |
| hypothetical protein | APR52_07255 | Q8X638 | Positive | 1584132 - 1584716 | 20908.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
