Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter | APR52_07150 | Q0ZAH7 | Negative | 1562833 - 1564818 | 71482.0 |
| arabinose 5-phosphate isomerase | APR52_07155 | Q9HVW0 | Positive | 1564942 - 1565943 | 34535.2 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | APR52_07160 | Q8ZB47 | Positive | 1565943 - 1566491 | 19897.9 |
| lps export abc transporter periplasmic protein lptc | APR52_07165 | Not Available | Positive | 1566488 - 1567135 | 23653.2 |
| short-chain dehydrogenase | APR52_07170 | Q7Q732 | Positive | 1567146 - 1567934 | 27766.7 |
| hypothetical protein | APR52_07180 | A0A0H3AJF5 | Positive | 1568781 - 1569344 | 20292.4 |
| homoserine o-acetyltransferase | APR52_07185 | B7X2B6 | Positive | 1569501 - 1570661 | 42412.0 |
| methionine biosynthesis protein metw | APR52_07190 | Q7UG04 | Positive | 1570658 - 1571245 | 21878.3 |
| impact family protein | APR52_07195 | P32437 | Positive | 1571262 - 1571849 | 20274.6 |
| ion transporter | APR52_07200 | Q02006 | Negative | 1571794 - 1572747 | 34638.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
