Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_07100 | Not Available | Negative | 1550531 - 1551052 | 18319.2 |
| dna gyrase subunit b | APR52_07105 | P22118 | Negative | 1551386 - 1554007 | 96022.5 |
| dna polymerase iii subunit beta | APR52_07110 | Q9I7C4 | Negative | 1554148 - 1555254 | 40283.8 |
| chromosomal replication initiator dnaa | APR52_07115 | A2SBM4 | Negative | 1555376 - 1556755 | 51482.1 |
| ribonuclease p protein component | APR52_07120 | Not Available | Positive | 1557348 - 1557770 | 15359.6 |
| membrane protein insertion efficiency factor yidd | APR52_07125 | Q21QM3 | Positive | 1557767 - 1558054 | 10575.8 |
| insertase | APR52_07130 | Q0K5C1 | Positive | 1558051 - 1559748 | 62363.9 |
| trna modification gtpase trme | APR52_07135 | A1TWI4 | Positive | 1559825 - 1561234 | 49033.9 |
| crp/fnr family transcriptional regulator | APR52_07140 | Not Available | Positive | 1561341 - 1561802 | 16554.9 |
| hypothetical protein | APR52_07145 | Not Available | Positive | 1561879 - 1562820 | 31951.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
