Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin | APR52_07050 | Not Available | Positive | 1541160 - 1542059 | 32857.0 |
| nadph-dependent fmn reductase | APR52_07055 | Not Available | Positive | 1542152 - 1543225 | 39948.1 |
| hypothetical protein | APR52_07060 | Not Available | Positive | 1543377 - 1543943 | 20447.2 |
| serine/threonine protein kinase | APR52_07065 | Not Available | Negative | 1544043 - 1544480 | 15255.0 |
| hypothetical protein | APR52_07070 | Not Available | Positive | 1544730 - 1545575 | 30720.8 |
| cardiolipin synthase | APR52_07075 | Q8Z883 | Positive | 1545590 - 1546861 | 48100.0 |
| hypothetical protein | APR52_07080 | P75770 | Positive | 1546858 - 1547862 | 36339.2 |
| hypothetical protein | APR52_07085 | Not Available | Positive | 1548019 - 1548534 | 18201.6 |
| serine/threonine protein phosphatase | APR52_07090 | Q08BG1 | Negative | 1548544 - 1549791 | 45045.9 |
| hypothetical protein | APR52_07095 | Not Available | Negative | 1549911 - 1550399 | 17015.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
