Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl synthase | APR52_06945 | Not Available | Positive | 1516725 - 1518026 | 43999.3 |
| fatty acid hydroxylase | APR52_06950 | Q6NYE4 | Positive | 1518073 - 1519209 | 42387.4 |
| gnat family acetyltransferase | APR52_06955 | Not Available | Positive | 1519269 - 1519751 | 18168.0 |
| copper-transporting atpase | APR52_06960 | O32220 | Negative | 1519759 - 1522017 | 78321.6 |
| heavy metal transporter | APR52_06965 | Not Available | Positive | 1522165 - 1522359 | 6883.09 |
| merr family transcriptional regulator | APR52_06970 | Not Available | Positive | 1522356 - 1522775 | 15548.7 |
| gtpase | APR52_06975 | Not Available | Negative | 1522780 - 1523754 | 33646.6 |
| two-component system response regulator | APR52_06980 | P08368 | Positive | 1524315 - 1525121 | 29318.3 |
| histidine kinase | APR52_06985 | P08401 | Positive | 1525118 - 1526566 | 53653.6 |
| hypothetical protein | APR52_06990 | Not Available | Negative | 1526568 - 1527179 | 23120.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
