Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_06895 | Not Available | Negative | 1509462 - 1509647 | 6044.98 |
| glutathione s-transferase | APR52_06900 | P15214 | Positive | 1509825 - 1510433 | 22414.9 |
| 1,2-oxophytodienoate reductase | APR52_06905 | P77258 | Positive | 1510651 - 1511754 | 39244.3 |
| hypothetical protein | APR52_06910 | Not Available | Positive | 1511800 - 1512285 | 17023.7 |
| gcn5 family acetyltransferase | APR52_06915 | Not Available | Positive | 1512282 - 1512764 | 17946.6 |
| hypothetical protein | APR52_06920 | P52096 | Positive | 1512761 - 1513171 | 15145.0 |
| histidine kinase | APR52_06925 | P45336 | Negative | 1513155 - 1514561 | 50754.2 |
| two-component system response regulator | APR52_06930 | Q8XBS3 | Negative | 1514575 - 1515264 | 24955.1 |
| esterase | APR52_06935 | Not Available | Positive | 1515402 - 1516274 | 32094.6 |
| phosphopantetheine-binding protein | APR52_06940 | Not Available | Positive | 1516435 - 1516728 | 10443.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
