Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein dinb | APR52_06845 | Not Available | Negative | 1499148 - 1499657 | 18383.6 |
| 2-hydroxy-acid oxidase | APR52_06850 | Not Available | Positive | 1499869 - 1501293 | 50590.6 |
| peptidoglycan-binding protein | APR52_06855 | Not Available | Negative | 1501385 - 1502290 | 30735.6 |
| chromosome partitioning protein parb | APR52_06860 | P0A151 | Negative | 1502400 - 1503362 | 34271.1 |
| alpha/beta hydrolase | APR52_06865 | Not Available | Negative | 1503362 - 1503910 | 20270.9 |
| chromosome partitioning protein | APR52_06870 | P0A149 | Negative | 1503953 - 1504870 | 32338.1 |
| lysine transporter lyse | APR52_06875 | A8A0Z3 | Negative | 1504880 - 1505494 | 21510.1 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | APR52_06880 | B9M9W4 | Negative | 1505642 - 1506280 | 22821.8 |
| trna uridine 5-carboxymethylaminomethyl modification protein | APR52_06885 | C5CW10 | Negative | 1506277 - 1508229 | 71440.2 |
| transglutaminase | APR52_06890 | Not Available | Negative | 1508400 - 1509284 | 32153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
