Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | APR52_06645 | Not Available | Positive | 1458881 - 1460818 | 70038.6 |
| hypothetical protein | APR52_06650 | Not Available | Negative | 1460829 - 1461728 | 33156.0 |
| hypothetical protein | APR52_06655 | Not Available | Negative | 1461730 - 1462575 | 30019.8 |
| abc transporter substrate-binding protein | APR52_06660 | Not Available | Negative | 1462598 - 1463578 | 34263.8 |
| hypothetical protein | APR52_06665 | Not Available | Positive | 1463682 - 1464755 | 39169.6 |
| hypothetical protein | APR52_06670 | Not Available | Negative | 1464805 - 1466070 | 43516.8 |
| fad-dependent oxidoreductase | APR52_06675 | P49109 | Positive | 1466528 - 1468330 | 66493.8 |
| crp/fnr family transcriptional regulator | APR52_06680 | Q79VI7 | Negative | 1468343 - 1469053 | 25952.2 |
| hypothetical protein | APR52_06685 | P42616 | Negative | 1469067 - 1469447 | 13991.7 |
| 3-keto-5-aminohexanoate cleavage protein | APR52_06690 | Q8RHX2 | Positive | 1469604 - 1470524 | 33366.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
