Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate--coa ligase | APR52_06595 | Q8GQN9 | Positive | 1448280 - 1449827 | 56240.1 |
| alpha/beta hydrolase | APR52_06600 | Not Available | Positive | 1449824 - 1450630 | 29894.6 |
| abc transporter permease | APR52_06605 | Not Available | Positive | 1450627 - 1451802 | 41450.7 |
| abc transporter permease | APR52_06610 | Not Available | Positive | 1451951 - 1452823 | 31406.7 |
| abc transporter permease | APR52_06615 | Not Available | Positive | 1452850 - 1453842 | 34263.9 |
| abc transporter atp-binding protein | APR52_06620 | Not Available | Positive | 1453839 - 1454591 | 26580.8 |
| abc transporter atp-binding protein | APR52_06625 | Not Available | Positive | 1454677 - 1455378 | 25302.1 |
| hypothetical protein | APR52_06630 | Not Available | Positive | 1455388 - 1456287 | 33000.6 |
| feruloyl esterase | APR52_06635 | D4AS70 | Positive | 1456421 - 1458250 | 62222.4 |
| hypothetical protein | APR52_06640 | Not Available | Negative | 1458260 - 1458718 | 16433.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
