Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-transferase | APR52_06445 | Not Available | Negative | 1416711 - 1417943 | 43498.1 |
| acyl-coa dehydrogenase | APR52_06450 | Q2KHZ9 | Negative | 1418095 - 1419294 | 43219.0 |
| lysr family transcriptional regulator | APR52_06455 | Not Available | Positive | 1419471 - 1420373 | 32768.5 |
| hypothetical protein | APR52_06460 | P0A9E4 | Positive | 1420379 - 1421311 | 34697.7 |
| toxin | APR52_06465 | Not Available | Negative | 1421330 - 1422115 | 29574.8 |
| hypothetical protein | APR52_06470 | Not Available | Negative | 1422112 - 1422411 | 10598.0 |
| proline hydroxylase | APR52_06475 | P9WLH6 | Positive | 1422576 - 1423286 | 26244.3 |
| guanylate cyclase | APR52_06480 | Not Available | Positive | 1423475 - 1425442 | 71997.3 |
| hypothetical protein | APR52_06485 | Not Available | Negative | 1425569 - 1426042 | 16636.3 |
| acetoacetyl-coa synthetase | APR52_06490 | Q9Z3R3 | Negative | 1426050 - 1428044 | 73393.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
