Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | APR52_00020 | Not Available | Negative | 1583 - 3877 | 82764.5 |
| hypothetical protein | APR52_00025 | P0ACQ8 | Positive | 4191 - 5087 | 31888.0 |
| hypothetical protein | APR52_00030 | Not Available | Positive | 5084 - 6064 | 34160.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 5333 - 5445 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 5981 - 7523 | Not Available |
| hypothetical protein | APR52_00035 | Not Available | Negative | 6098 - 6388 | 10120.0 |
| hypothetical protein | APR52_00040 | Not Available | Positive | 6578 - 7357 | 28756.2 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 8111 - 10997 | Not Available |
| acyl-coa synthetase | APR52_00045 | Not Available | Negative | 7371 - 8948 | 56980.1 |
| acetyl-coa acetyltransferase | APR52_00050 | Not Available | Negative | 8963 - 10138 | 41376.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
