Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug dmt transporter permease | APR52_06295 | Not Available | Positive | 1386531 - 1387433 | 32432.4 |
| glutaminase a | APR52_06300 | B9JFR4 | Positive | 1387447 - 1388388 | 33001.5 |
| n-acylglucosamine 2-epimerase | APR52_06305 | F2JVT6 | Negative | 1388595 - 1389830 | 47003.9 |
| hypothetical protein | APR52_06310 | Not Available | Negative | 1389886 - 1390872 | 35819.2 |
| lysr family transcriptional regulator | APR52_06315 | Not Available | Positive | 1390969 - 1391898 | 33767.0 |
| hypothetical protein | APR52_06320 | Not Available | Positive | 1391895 - 1392395 | 18476.4 |
| abc transporter substrate-binding protein | APR52_06325 | Q8YBN1 | Positive | 1392807 - 1394000 | 42758.4 |
| urea abc transporter permease subunit urtb | APR52_06330 | Not Available | Positive | 1394006 - 1394908 | 32355.2 |
| urea abc transporter permease subunit urtc | APR52_06335 | Not Available | Positive | 1394919 - 1395968 | 37323.7 |
| abc transporter atp-binding protein | APR52_06340 | Not Available | Positive | 1395983 - 1396765 | 28976.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
