Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase | APR52_06245 | Not Available | Negative | 1374042 - 1375625 | 58307.0 |
| hypothetical protein | APR52_06250 | P35158 | Positive | 1375733 - 1376962 | 42897.9 |
| arac family transcriptional regulator | APR52_06255 | Q03320 | Negative | 1376959 - 1377972 | 36164.3 |
| epimerase | APR52_06260 | G7IYC1 | Positive | 1378037 - 1379065 | 36326.8 |
| hypothetical protein | APR52_06265 | Not Available | Negative | 1379085 - 1379975 | 32663.1 |
| hypothetical protein | APR52_06270 | Not Available | Positive | 1380163 - 1382364 | 77080.1 |
| hypothetical protein | APR52_06275 | Q08347 | Negative | 1382372 - 1384363 | 72401.5 |
| lysr family transcriptional regulator | APR52_06280 | Not Available | Positive | 1384477 - 1385400 | 33169.3 |
| flavin reductase | APR52_06285 | Q6Q271 | Positive | 1385431 - 1385940 | 17969.2 |
| transporter | APR52_06290 | Not Available | Positive | 1385955 - 1386443 | 17724.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
