Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | APR52_06195 | Q3V4U3 | Negative | 1362466 - 1364790 | 85593.2 |
| threonine dehydratase | APR52_06200 | Q74FW6 | Positive | 1364898 - 1366106 | 42473.6 |
| phosphoenolpyruvate carboxykinase | APR52_06205 | B2U804 | Positive | 1366528 - 1368375 | 67174.9 |
| hypothetical protein | APR52_06210 | Not Available | Negative | 1368463 - 1369008 | 19091.0 |
| lysr family transcriptional regulator | APR52_06215 | Not Available | Positive | 1369111 - 1370091 | 35903.5 |
| hypothetical protein | APR52_06220 | Not Available | Negative | 1370108 - 1370326 | 7845.39 |
| metallophosphoesterase | APR52_06225 | Q5UQ73 | Positive | 1370408 - 1371214 | 29819.5 |
| hypothetical protein | APR52_06230 | Q53868 | Positive | 1371287 - 1371691 | 14248.2 |
| tetr family transcriptional regulator | APR52_06235 | Not Available | Negative | 1371688 - 1372302 | 21848.6 |
| histidine kinase | APR52_06240 | Q3Z1N3 | Negative | 1372385 - 1373869 | 55962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
