Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose phosphate epimerase | APR52_06140 | B7MSS8 | Positive | 1352583 - 1353281 | 25814.8 |
| deor family transcriptional regulator | APR52_06145 | Q51391 | Positive | 1353369 - 1354148 | 27906.6 |
| methionine sulfoxide reductase a | APR52_06150 | Q98DV6 | Negative | 1354159 - 1354863 | 25062.4 |
| hypothetical protein | APR52_06155 | Not Available | Negative | 1354984 - 1355238 | 8959.09 |
| molybdopterin-binding protein | APR52_06160 | G8QM63 | Negative | 1355347 - 1356138 | 29697.5 |
| cytochrome b | APR52_06165 | G8QM62 | Negative | 1356170 - 1356802 | 23313.1 |
| two-component system response regulator | APR52_06170 | P35163 | Positive | 1356900 - 1357625 | 27070.7 |
| histidine kinase | APR52_06175 | Not Available | Positive | 1357625 - 1359115 | 54059.4 |
| enoyl-coa hydratase | APR52_06180 | Not Available | Positive | 1359232 - 1360155 | 34031.6 |
| peptidase s41 | APR52_06190 | Not Available | Negative | 1360758 - 1362335 | 54804.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
