Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_06090 | O54983 | Positive | 1341005 - 1341904 | 31250.7 |
| fad-dependent oxidoreductase | APR52_06095 | Q6DCP1 | Positive | 1341933 - 1343105 | 42371.4 |
| fructose-bisphosphate aldolase | APR52_06100 | Q8P5Z7 | Positive | 1343152 - 1344177 | 35876.3 |
| 4-hydroxybutyrate coa-transferase | APR52_06105 | P38942 | Positive | 1344226 - 1345521 | 46493.7 |
| hypothetical protein | APR52_06110 | P36945 | Negative | 1345529 - 1346425 | 30993.0 |
| transcriptional regulator | APR52_06115 | A0QYB5 | Positive | 1346662 - 1347603 | 32524.3 |
| d-ribose transporter atp-binding protein | APR52_06120 | Q3MB44 | Positive | 1347618 - 1349129 | 54900.2 |
| haloacid dehalogenase | APR52_06125 | P77247 | Positive | 1349126 - 1349863 | 25983.1 |
| ribose abc transporter permease | APR52_06130 | Not Available | Positive | 1349901 - 1350932 | 35238.9 |
| ribulokinase | APR52_06135 | B7MAI6 | Positive | 1350938 - 1352596 | 59018.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
