Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_06040 | Q8FK37 | Positive | 1328816 - 1330588 | 64496.1 |
| hypothetical protein | APR52_06045 | Not Available | Positive | 1330750 - 1332063 | 43273.5 |
| hypothetical protein | APR52_06050 | Not Available | Positive | 1332271 - 1333299 | 36983.1 |
| diaminopropionate ammonia-lyase | APR52_06055 | Not Available | Negative | 1333537 - 1334766 | 43566.7 |
| amidohydrolase | APR52_06060 | Not Available | Negative | 1334795 - 1335988 | 42208.4 |
| hypothetical protein | APR52_06065 | P55658 | Positive | 1336087 - 1336578 | 18026.8 |
| hypothetical protein | APR52_06070 | Not Available | Positive | 1336857 - 1337552 | 25529.6 |
| aldo/keto reductase | APR52_06075 | Not Available | Positive | 1337692 - 1338720 | 37327.4 |
| lysr family transcriptional regulator | APR52_06080 | Not Available | Negative | 1338727 - 1339626 | 33619.1 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_06085 | Q8FYS6 | Positive | 1339882 - 1340994 | 39148.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
