Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione abc transporter permease | APR52_05990 | Q8X6V6 | Negative | 1316682 - 1317611 | 33270.9 |
| glutathione abc transporter permease | APR52_05995 | Q6D3B1 | Negative | 1317622 - 1318542 | 34025.8 |
| glutathione abc transporter substrate-binding protein | APR52_06000 | Q8Z863 | Negative | 1318624 - 1320177 | 57240.5 |
| glutathione abc transporter atp-binding protein | APR52_06005 | Q6D3A9 | Negative | 1320269 - 1322161 | 68934.9 |
| isoaspartyl peptidase | APR52_06010 | P37595 | Negative | 1322188 - 1323177 | 33936.2 |
| transcriptional regulator | APR52_06015 | Not Available | Negative | 1323174 - 1324136 | 33813.2 |
| lysr family transcriptional regulator | APR52_06020 | Not Available | Negative | 1324366 - 1325304 | 33982.9 |
| tartrate dehydrogenase | APR52_06025 | O34296 | Positive | 1325421 - 1326509 | 39162.0 |
| mfs transporter | APR52_06030 | Not Available | Positive | 1326584 - 1327573 | 34783.1 |
| hypothetical protein | APR52_06035 | Not Available | Positive | 1328084 - 1328767 | 24391.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
